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Welcome to OrthoSelect
OrthoSelect
Orthologs in Phylogenomics!
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New Analysis
Parameters
Sequence Upload
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View the documentation for this page
here
or get to know OrthoSelect by taking a look at the
Tutorial
.
Project Details
Name:
Email address:
Parameters
Default Parameters (
)
Orthology Search
Expectation value: 1e-10
Minimum length of hit (in AA): 20
Eliminate Redundancies
Type of distance matrix: custom
Alignment method: Muscle
Post Processing
Method: Gblocks
Filtering threshold: 50 %
Expert mode
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Click
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to view the documentation for this page.
Orthology Detection
Expectation value:
1e-
3
10
20
30
40
Minimum length of hit (in AAs):
10
20
30
40
50
60
Eliminate Redundancies
Alignment method:
Muscle
T-Coffee
Dialign
Type of distance matrix:
custom
Clustalw
Post Processing
Method:
Gblocks
Threshold for filtering sequences:
20
30
40
50
60
70
80
90
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