OrthoSelect
Orthologs in Phylogenomics!

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Where you are

View ortholog groups.

Useful Links

View the documentation for this page here
or get to know OrthoSelect by taking a look at theTutorial

Download section


Here you can download the programm OrthoSelect including a user manual and external software used by the programm.
Note that OrthoSelect contains a way to automatically download all required external programs.

OrthoSelect


Command line tool You can download the latest version here
Manual (pdf) You can download the latest version here

External Programs


Required programs
ProgramVersion (tested)Download Link
Bioperl1.5.1Link
Blast2.2.18Link
ESTScan2.2.1Link
Wise2.2.0Link
Clustalw2.0.8Link
T-Coffee5.72Link
Muscle3.7Link
Gblocks0.91bLink

Test data


Test sequences from JGI
TaxonType of SequenceTest dataset Original Sequences
Aspergillus nigerTranscriptsLink Link
Ciona intestinalisESTs Link Link
Daphnia pulexTranscripts Link Link
Lottia giganteaESTs Link Link
Monosiga brevicollisESTs Link Link
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