OrthoSelect
Orthologs in Phylogenomics!

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Your Results
(ID:2009_4_24_552742617)




Overview of your results
Sequences48
Taxa5
List of TaxaAspergillus_niger, Ciona_intestinalis, Daphnia_pulex, Lottia_gigantea, Monosiga_brevicollis,
No of ortholog groups6
List of OGs KOG0003, KOG0019, KOG0020, KOG0027, KOG0179, KOG0213,

Statistics

Here you see the composition of functional classes and a present/absent table
for each taxon and ortholog group
( need help )

Overview of functional classification

Functional classification overview

CharacterAnnotationOccurrences
ARNA processing and modification8
JTranslation, ribosomal structure and biogenesis8
OPosttranslational modification, protein turnover, chaperones30
TSignal transduction mechanisms10

Data matrices with present/absent information for each species and ortholog group

View table of (selected/best) ortholog groups
View table for all ortholog groups

Annotations

View the annotations of your sequences ( need help )
TaxonLink
Aspergillus_niger
Ciona_intestinalis
Daphnia_pulex
Lottia_gigantea
Monosiga_brevicollis

Best Orthologous Groups

Here you have those ortholog groups with at least one sequence from at least three species available.
Note that no species were selected for "gene selection" ( need help )
Click here if you are why there are two different sets orthologous groups.
Orthologous GroupAnnotationSequencesTaxaLink
KOG0003Ubiquitin/60s ribosomal protein L40 fusion 4 4
KOG0019Molecular chaperone (HSP90 family) 5 5
KOG0020Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family 5 5
KOG0027Calmodulin and related proteins (EF-Hand superfamily) 5 5
KOG017920S proteasome, regulatory subunit beta type PSMB1/PRE7 5 5
KOG0213Splicing factor 3b, subunit 1 5 5

All Orthologous Groups


View all ortholog groups sequences have been assigned to ( need help )
Click here if you are why there are two different sets orthologous groups.
Ortholog GroupAnnotationSequencesTaxaLink
KOG0003Ubiquitin/60s ribosomal protein L40 fusion 7 4
KOG0004Ubiquitin/40S ribosomal protein S27a fusion 1 1
KOG0019Molecular chaperone (HSP90 family) 14 5
KOG0020Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family 9 5
KOG0027Calmodulin and related proteins (EF-Hand superfamily) 10 5
KOG017920S proteasome, regulatory subunit beta type PSMB1/PRE7 7 5
KOG0213Splicing factor 3b, subunit 1 8 5


Legend
1 hits
a few hits
many (>8) hits